Check if the command "crypto map map-name seq-num [ipsec-isakmp] [dynamic dynamic-map-name] [discover] [profile profile-name]" with "dynamic" option is used as this will make the dynamic map to be used instead of the crypto map configured.
Dynamic option specifies that this crypto map entry is to reference a preexisting dynamic crypto map. Dynamic crypto maps are policy templates used in processing negotiation requests from a peer IPSec device. If you use this keyword, none of the crypto map configuration commands will be available.
Try using "crypto map map-name seq-num [ipsec-manual]"
Refer teh following url for more information about this command:
http://www.cisco.com/en/US/docs/ios/12_3/security/command/reference/sec_c2g.html#wp1073142