Hello,
There are couple things needs to be looked at, we need more info as of IOS, topology and configuration in order to determine possible issues. When you do shut/no shut on the IMA interface, the logical link ID changed in the IMA. This worth a TAC case to discuss further than a simple email.
I suggest you pen a case with our TAC.
Call our TAC 24x7 at 800-553-2447.
regards,
Bessie