Re: TCP Traffic is delayed through tunnel - we think...
That all looks fine to me. The "missing" traceroute reply is from the far end router. Since it is terminating the VPN it will not "see" the traffic in decrypted form.
Look elsewhere for your issue.
In general networks cannot store packets for very long, so if you are seeing delays in response they will be caused by either the end stations or by packet losses and retransmission timeouts before retransmitions.
54ms RTT indicates either that you are using DSL technology, have the end stations 2000 miles apart or that the link is busy such that the packet queues are full on the router.
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We have configured the outside and inside Interface with official ipv6 adresses, set a default route on outside Interface to our router, we also have definied a rule , which also gets hits, to permit tcp from inside Interface to any6.
In Syslog I also se...